Gene detail information of Glyur000036s00004661.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 361976 | 362200 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00544 | BHMT | EC:2.1.1.5 | Glycine, serine and threonine metabolism | map00260 |
| Cysteine and methionine metabolism | map00270 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.725 |
| SRR1783600 | control | 1.296 |
| SRR1783602 | moderate drought stress | 0.637 |
| SRR1811619 | moderate drought stress | 1.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.745 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.570 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.485 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.484 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.440 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.776 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.932 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.128 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.190 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.170 |
| SRR8749032 | Uninduced | 0.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.005 |