Gene detail information of Glyur000037s00002614.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G17410.19.00E-129ARID/BRIGHT DNA-binding domain-containing protein
NRXP_003537701.10PREDICTED: AT-rich interactive domain-containing protein 3-like isoform X1 [Glycine max]
Swissprottr|Q940Y3|ARID3_ARATH4.00E-155AT-rich interactive domain-containing protein 3
trEMBLtr|I1LID7|I1LID7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G09370.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00037126612133503+


Gene family

Gene familysubfamily
Transcription Factors FamilyARID


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000037s00002614.1PF01388.16ARID2813707.40E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.772
SRR1783600control10.371
SRR1783602moderate drought stress9.103
SRR1811619moderate drought stress9.044

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.564
DRR006520Root Summer glycyrrhizin high producing strain14.056
DRR006521Root Winter glycyrrhizin high producing strain16.839
DRR006522Root Winter glycyrrhizin high producing strain16.098
DRR006523Root Summer glycyrrhizin low producing strain15.718
DRR006524Root Summer glycyrrhizin low producing strain15.994
DRR006525Leaf Summer glycyrrhizin high producing strain20.793
DRR006526Leaf Summer glycyrrhizin high producing strain20.843

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.028
SRR2868004Drought Stress(Tissue:root)25.690
SRR2967015Control (Tissue:root)27.734

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.935
SRR9715740Leave30.750
SRR9715741Leave36.532
SRR9715739Root3.117
SRR9715742Root13.062
SRR9715743Root11.848

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.189
SRR8749028MeJA induced 9h30.166
SRR8749029MeJA induced 9h22.566
SRR8749030Uninduced19.643
SRR8749031Uninduced23.190
SRR8749032Uninduced12.545

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.786
SRR8400027Control-Root21.785

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved