Gene detail information of Glyur000037s00002616.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G17420.12.00E-157NADPH-dependent thioredoxin reductase A
NRXP_004512292.10PREDICTED: thioredoxin reductase 2-like [Cicer arietinum]
COGYP_008712.14.00E-134thioredoxin-disulfide reductase 2 [Candidatus Protochlamydia amoebophila UWE25]
Swissprottr|Q39242|TRXB2_ARATH0Thioredoxin reductase 2
trEMBLtr|K7LNQ6|K7LNQ6_SOYBN0Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00037140204143897+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00384trxB EC:1.8.1.9 Pyrimidine metabolism map00240
Selenocompound metabolismmap00450


Gene Ontology

biological_process

GO:0019430  removal of superoxide radicals

GO:0055114  oxidation-reduction process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0004791  thioredoxin-disulfide reductase activity

GO:0016491  oxidoreductase activity

GO:0050660  flavin adenine dinucleotide binding

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000037s00002616.1PF07992.9Pyr_redox_2443357.00E-25
Glyur000037s00002616.1PF00070.22Pyr_redox1962604.20E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.287
SRR1783600control30.413
SRR1783602moderate drought stress20.881
SRR1811619moderate drought stress20.963

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.291
DRR006520Root Summer glycyrrhizin high producing strain30.537
DRR006521Root Winter glycyrrhizin high producing strain25.998
DRR006522Root Winter glycyrrhizin high producing strain24.869
DRR006523Root Summer glycyrrhizin low producing strain29.913
DRR006524Root Summer glycyrrhizin low producing strain30.305
DRR006525Leaf Summer glycyrrhizin high producing strain31.973
DRR006526Leaf Summer glycyrrhizin high producing strain31.933

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)77.790
SRR2868004Drought Stress(Tissue:root)50.846
SRR2967015Control (Tissue:root)48.417

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave55.037
SRR9715740Leave38.617
SRR9715741Leave65.570
SRR9715739Root29.800
SRR9715742Root37.741
SRR9715743Root37.008

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h61.275
SRR8749028MeJA induced 9h48.409
SRR8749029MeJA induced 9h48.425
SRR8749030Uninduced37.846
SRR8749031Uninduced22.930
SRR8749032Uninduced40.486

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root40.818
SRR8400027Control-Root41.367

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved