Gene detail information of Glyur000037s00002643.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G17530.32.00E-164Protein kinase superfamily protein
NRXP_004512277.10PREDICTED: SRSF protein kinase 1-like [Cicer arietinum]
COGYP_004584373.12.00E-12serine/threonine protein kinase with PASTA sensor(s) [Frankia symbiont of Datisca glomerata]
Swissprottr|P51568|AFC3_ARATH2.00E-39Serine/threonine-protein kinase AFC3
trEMBLtr|G7K189|G7K189_MEDTR0Serine/Threonine kinase family protein {ECO:0000313|EMBL:AES95328.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00037322603327401+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000037s00002643.1PF00069.20Pkinase403971.20E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.561
SRR1783600control12.108
SRR1783602moderate drought stress8.494
SRR1811619moderate drought stress8.878

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.715
DRR006520Root Summer glycyrrhizin high producing strain13.458
DRR006521Root Winter glycyrrhizin high producing strain12.434
DRR006522Root Winter glycyrrhizin high producing strain11.947
DRR006523Root Summer glycyrrhizin low producing strain12.672
DRR006524Root Summer glycyrrhizin low producing strain13.396
DRR006525Leaf Summer glycyrrhizin high producing strain6.298
DRR006526Leaf Summer glycyrrhizin high producing strain6.448

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.784
SRR2868004Drought Stress(Tissue:root)34.705
SRR2967015Control (Tissue:root)31.053

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.331
SRR9715740Leave14.509
SRR9715741Leave16.129
SRR9715739Root2.255
SRR9715742Root10.659
SRR9715743Root8.007

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.667
SRR8749028MeJA induced 9h5.718
SRR8749029MeJA induced 9h4.727
SRR8749030Uninduced7.893
SRR8749031Uninduced6.384
SRR8749032Uninduced3.968

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.008
SRR8400027Control-Root28.476

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved