Gene detail information of Glyur000037s00002654.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66005.3 | 6.00E-75 | Expressed protein |
| NR | XP_003612365.1 | 4.04E-123 | Nucleoside-triphosphatase, putative [Medicago truncatula] |
| COG | YP_004625905.1 | 4.00E-29 | thymidylate kinase [Thermodesulfatator indicus DSM 15286] |
| trEMBL | tr|G7K184|G7K184_MEDTR | 2.00E-123 | Cancer-related nucleoside-triphosphatase-like protein {ECO:0000313|EMBL:AES95323.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00037 | 381094 | 385498 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K06928 | NTPCR | EC:3.6.1.15 | Purine metabolism | map00230 |
| Thiamine metabolism | map00730 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000037s00002654.3 | PF03266.10 | NTPase_1 | 8 | 181 | 1.40E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.665 |
| SRR1783600 | control | 13.216 |
| SRR1783602 | moderate drought stress | 15.432 |
| SRR1811619 | moderate drought stress | 14.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.957 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.997 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.827 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.948 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.715 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.601 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.655 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.361 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.986 |
| SRR2967015 | Control (Tissue:root) | 8.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.904 |
| SRR9715740 | Leave | 7.310 |
| SRR9715741 | Leave | 6.845 |
| SRR9715739 | Root | 4.078 |
| SRR9715742 | Root | 4.833 |
| SRR9715743 | Root | 3.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.366 |
| SRR8749028 | MeJA induced 9h | 3.829 |
| SRR8749029 | MeJA induced 9h | 5.155 |
| SRR8749030 | Uninduced | 3.721 |
| SRR8749031 | Uninduced | 1.765 |
| SRR8749032 | Uninduced | 2.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.338 |
| SRR8400027 | Control-Root | 11.400 |