Gene detail information of Glyur000037s00002675.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G35640.15.00E-125serine acetyltransferase 3;2
NRXP_003612319.10Serine acetyltransferase [Medicago truncatula]
COGYP_526558.11.00E-99serine O-acetyltransferase [Saccharophagus degradans 2-40]
Swissprottr|Q10S58|SAT2_ORYSJ5.00E-158Probable serine acetyltransferase 2
trEMBLtr|G7K010|G7K010_MEDTR0Serine acetyltransferase {ECO:0000313|EMBL:AES95277.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00037504992510481-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00640cysE EC:2.3.1.30 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Sulfur metabolismmap00920
Cysteine and methionine metabolismmap00270
Biofilm formation - Vibrio choleraemap05111


Gene Ontology

biological_process

GO:0006535  cysteine biosynthetic process from serine


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0009001  serine O-acetyltransferase activity

GO:0016740  transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000037s00002675.1PF06426.9SATase_N651681.90E-34
Glyur000037s00002675.1PF00132.19Hexapep2492822.90E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.016
SRR1783600control5.090
SRR1783602moderate drought stress9.155
SRR1811619moderate drought stress9.081

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.486
DRR006520Root Summer glycyrrhizin high producing strain14.359
DRR006521Root Winter glycyrrhizin high producing strain13.441
DRR006522Root Winter glycyrrhizin high producing strain12.846
DRR006523Root Summer glycyrrhizin low producing strain16.157
DRR006524Root Summer glycyrrhizin low producing strain15.704
DRR006525Leaf Summer glycyrrhizin high producing strain52.984
DRR006526Leaf Summer glycyrrhizin high producing strain51.952

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.609
SRR2868004Drought Stress(Tissue:root)18.695
SRR2967015Control (Tissue:root)17.828

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave48.461
SRR9715740Leave67.098
SRR9715741Leave46.044
SRR9715739Root3.089
SRR9715742Root8.344
SRR9715743Root7.968

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.345
SRR8749028MeJA induced 9h3.116
SRR8749029MeJA induced 9h2.361
SRR8749030Uninduced3.297
SRR8749031Uninduced0.627
SRR8749032Uninduced1.470

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.017
SRR8400027Control-Root11.836

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved