Gene detail information of Glyur000038s00004442.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07220.1 | 8.00E-173 | Arabidopsis thaliana protein of unknown function (DUF821) |
| NR | XP_003552954.1 | 0 | PREDICTED: O-glucosyltransferase rumi-like [Glycine max] |
| trEMBL | tr|I1MZZ5|I1MZZ5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G07010.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00038 | 35745 | 40624 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT90 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000038s00004442.2 | PF05686.7 | Glyco_transf_90 | 3 | 158 | 6.10E-58 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.525 |
| SRR1783600 | control | 16.793 |
| SRR1783602 | moderate drought stress | 18.134 |
| SRR1811619 | moderate drought stress | 18.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.789 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.221 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 32.371 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 31.827 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.880 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.719 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.708 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.513 |
| SRR2868004 | Drought Stress(Tissue:root) | 11.826 |
| SRR2967015 | Control (Tissue:root) | 9.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 17.219 |
| SRR9715740 | Leave | 18.766 |
| SRR9715741 | Leave | 12.438 |
| SRR9715739 | Root | 10.170 |
| SRR9715742 | Root | 17.195 |
| SRR9715743 | Root | 14.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.898 |
| SRR8749028 | MeJA induced 9h | 6.812 |
| SRR8749029 | MeJA induced 9h | 9.152 |
| SRR8749030 | Uninduced | 4.250 |
| SRR8749031 | Uninduced | 1.336 |
| SRR8749032 | Uninduced | 2.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 29.545 |
| SRR8400027 | Control-Root | 27.843 |