Gene detail information of Glyur000038s00004453.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G07230.10non-specific phospholipase C1
NRKEH34259.10non-specific phospholipase C4 [Medicago truncatula]
COGYP_003881454.11.00E-58phospholipase C 4 [Dickeya dadantii 3937]
Swissprottr|Q8L7Y9|NPC1_ARATH0Non-specific phospholipase C1 (Precursor)
trEMBLtr|A0A072UWP8|A0A072UWP8_MEDTR0Non-specific phospholipase C4 {ECO:0000313|EMBL:KEH34259.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000388974693866-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01114plcC EC:3.1.4.3 Inositol phosphate metabolism map00562
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565
Quorum sensingmap02024
Thyroid hormone signaling pathwaymap04919


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016788  hydrolase activity, acting on ester bonds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000038s00004453.1PF04185.9Phosphoesterase393991.50E-99


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control98.986
SRR1783600control99.181
SRR1783602moderate drought stress105.990
SRR1811619moderate drought stress104.948

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain99.777
DRR006520Root Summer glycyrrhizin high producing strain98.300
DRR006521Root Winter glycyrrhizin high producing strain53.093
DRR006522Root Winter glycyrrhizin high producing strain51.642
DRR006523Root Summer glycyrrhizin low producing strain110.484
DRR006524Root Summer glycyrrhizin low producing strain111.028
DRR006525Leaf Summer glycyrrhizin high producing strain79.474
DRR006526Leaf Summer glycyrrhizin high producing strain78.866

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)73.057
SRR2868004Drought Stress(Tissue:root)77.257
SRR2967015Control (Tissue:root)110.830

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.098
SRR9715740Leave50.589
SRR9715741Leave54.065
SRR9715739Root64.933
SRR9715742Root60.722
SRR9715743Root57.174

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h54.457
SRR8749028MeJA induced 9h158.275
SRR8749029MeJA induced 9h43.622
SRR8749030Uninduced46.177
SRR8749031Uninduced30.247
SRR8749032Uninduced24.946

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root108.059
SRR8400027Control-Root102.546

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved