Gene detail information of Glyur000038s00004463.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72210.1 | 2.00E-69 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | KHN27371.1 | 9.03E-147 | Transcription factor bHLH96 [Glycine soja] |
| Swissprot | tr|Q9C7T4|BH096_ARATH | 8.00E-91 | Transcription factor bHLH96 |
| trEMBL | tr|I1JVA4|I1JVA4_SOYBN | 3.00E-142 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G10630.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00038 | 147358 | 149617 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000038s00004463.1 | PF00010.21 | HLH | 116 | 167 | 5.60E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.883 |
| SRR1783600 | control | 23.007 |
| SRR1783602 | moderate drought stress | 14.160 |
| SRR1811619 | moderate drought stress | 14.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.901 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.724 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 106.363 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 104.373 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.363 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.745 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.055 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 38.798 |
| SRR2868004 | Drought Stress(Tissue:root) | 18.668 |
| SRR2967015 | Control (Tissue:root) | 21.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.348 |
| SRR9715740 | Leave | 0.094 |
| SRR9715741 | Leave | 0.539 |
| SRR9715739 | Root | 7.214 |
| SRR9715742 | Root | 15.603 |
| SRR9715743 | Root | 15.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.419 |
| SRR8749028 | MeJA induced 9h | 23.709 |
| SRR8749029 | MeJA induced 9h | 45.002 |
| SRR8749030 | Uninduced | 12.934 |
| SRR8749031 | Uninduced | 2.481 |
| SRR8749032 | Uninduced | 3.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 22.359 |
| SRR8400027 | Control-Root | 28.330 |