Gene detail information of Glyur000038s00004477.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G22440.19.00E-133Zinc-binding alcohol dehydrogenase family protein
NRXP_003602833.10Alcohol dehydrogenase-like protein [Medicago truncatula]
COGYP_003147226.12.00E-102S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Kangiella koreensis DSM 16069]
Swissprottr|Q9SK87|ADHL2_ARATH3.00E-173Alcohol dehydrogenase-like 2
trEMBLtr|G7J3Y9|G7J3Y9_MEDTR0Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:AES73084.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00038236908241704-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00121frmA, ADH5, adhC EC:1.1.1.284 1.1.1.1 Carbon metabolism map01200
Degradation of aromatic compoundsmap01220
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Fatty acid degradationmap00071
Tyrosine metabolismmap00350
Retinol metabolismmap00830
Chloroalkane and chloroalkene degradationmap00625
Naphthalene degradationmap00626
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000038s00004477.2PF08240.7ADH_N671536.50E-09
Glyur000038s00004477.2PF00107.21ADH_zinc_N1732962.00E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.916
SRR1783600control2.930
SRR1783602moderate drought stress1.847
SRR1811619moderate drought stress1.775

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.556
DRR006520Root Summer glycyrrhizin high producing strain0.467
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.155
DRR006524Root Summer glycyrrhizin low producing strain0.178
DRR006525Leaf Summer glycyrrhizin high producing strain4.895
DRR006526Leaf Summer glycyrrhizin high producing strain4.753

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.975
SRR2868004Drought Stress(Tissue:root)19.316
SRR2967015Control (Tissue:root)26.793

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.966
SRR9715740Leave1.447
SRR9715741Leave1.560
SRR9715739Root6.047
SRR9715742Root1.344
SRR9715743Root3.136

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.152
SRR8749029MeJA induced 9h0.121
SRR8749030Uninduced0.019
SRR8749031Uninduced0.154
SRR8749032Uninduced0.046

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.784
SRR8400027Control-Root21.729

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved