Gene detail information of Glyur000038s00004499.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G48610.10non-specific phospholipase C6
NRXP_003523153.10PREDICTED: non-specific phospholipase C6-like [Glycine max]
COGYP_003881454.11.00E-62phospholipase C 4 [Dickeya dadantii 3937]
Swissprottr|Q8H965|NPC6_ARATH0Non-specific phospholipase C6 (Precursor)
trEMBLtr|I1JXK9|I1JXK9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G37360.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00038357226360252-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01114plcC EC:3.1.4.3 Inositol phosphate metabolism map00562
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565
Quorum sensingmap02024
Thyroid hormone signaling pathwaymap04919


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016788  hydrolase activity, acting on ester bonds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000038s00004499.1PF04185.9Phosphoesterase393954.50E-100


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.959
SRR1783600control22.155
SRR1783602moderate drought stress11.464
SRR1811619moderate drought stress11.434

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.611
DRR006520Root Summer glycyrrhizin high producing strain18.311
DRR006521Root Winter glycyrrhizin high producing strain3.507
DRR006522Root Winter glycyrrhizin high producing strain3.444
DRR006523Root Summer glycyrrhizin low producing strain24.149
DRR006524Root Summer glycyrrhizin low producing strain24.025
DRR006525Leaf Summer glycyrrhizin high producing strain7.954
DRR006526Leaf Summer glycyrrhizin high producing strain7.879

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.197
SRR2868004Drought Stress(Tissue:root)33.240
SRR2967015Control (Tissue:root)35.452

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.087
SRR9715740Leave5.211
SRR9715741Leave3.974
SRR9715739Root4.828
SRR9715742Root15.759
SRR9715743Root13.355

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.874
SRR8749028MeJA induced 9h81.747
SRR8749029MeJA induced 9h54.679
SRR8749030Uninduced14.286
SRR8749031Uninduced5.012
SRR8749032Uninduced10.047

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.064
SRR8400027Control-Root32.642

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved