Gene detail information of Glyur000038s00004512.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41040.1 | 5.00E-176 | HXXXD-type acyl-transferase family protein |
| NR | XP_003528100.1 | 0 | PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like isoform X1 [Glycine max] |
| Swissprot | tr|Q94CD1|HHT1_ARATH | 0 | Omega-hydroxypalmitate O-feruloyl transferase |
| trEMBL | tr|I1KC05|I1KC05_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G17590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00038 | 481822 | 483769 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K15400 | HHT1 | EC:2.3.1.188 | Cutin, suberine and wax biosynthesis | map00073 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000038s00004512.1 | PF02458.10 | Transferase | 13 | 430 | 7.40E-100 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.537 |
| SRR1783600 | control | 24.260 |
| SRR1783602 | moderate drought stress | 22.494 |
| SRR1811619 | moderate drought stress | 21.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.169 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.168 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.083 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 69.975 |
| SRR2868004 | Drought Stress(Tissue:root) | 81.278 |
| SRR2967015 | Control (Tissue:root) | 103.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.088 |
| SRR9715739 | Root | 41.945 |
| SRR9715742 | Root | 53.017 |
| SRR9715743 | Root | 52.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.464 |
| SRR8749028 | MeJA induced 9h | 1.273 |
| SRR8749029 | MeJA induced 9h | 0.533 |
| SRR8749030 | Uninduced | 0.629 |
| SRR8749031 | Uninduced | 1.203 |
| SRR8749032 | Uninduced | 0.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 161.404 |
| SRR8400027 | Control-Root | 133.469 |