Gene detail information of Glyur000039s00004186.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G38560.18.00E-156Protein kinase superfamily protein
NRXP_003530471.10PREDICTED: proline-rich receptor-like protein kinase PERK8-like [Glycine max]
COGYP_001958461.11.00E-26hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FFW5|PERK8_ARATH0Proline-rich receptor-like protein kinase PERK8
trEMBLtr|A0A072U7M3|A0A072U7M3_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:KEH21835.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000394721754182+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000039s00004186.1PF07714.12Pkinase_Tyr4466451.30E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.754
SRR1783600control19.395
SRR1783602moderate drought stress11.701
SRR1811619moderate drought stress11.962

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.148
DRR006520Root Summer glycyrrhizin high producing strain12.399
DRR006521Root Winter glycyrrhizin high producing strain0.426
DRR006522Root Winter glycyrrhizin high producing strain0.242
DRR006523Root Summer glycyrrhizin low producing strain3.345
DRR006524Root Summer glycyrrhizin low producing strain3.554
DRR006525Leaf Summer glycyrrhizin high producing strain5.751
DRR006526Leaf Summer glycyrrhizin high producing strain5.647

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.913
SRR2868004Drought Stress(Tissue:root)13.688
SRR2967015Control (Tissue:root)14.661

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.074
SRR9715740Leave3.482
SRR9715741Leave4.793
SRR9715739Root8.323
SRR9715742Root12.166
SRR9715743Root11.026

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.069
SRR8749028MeJA induced 9h8.379
SRR8749029MeJA induced 9h5.276
SRR8749030Uninduced0.915
SRR8749031Uninduced0.308
SRR8749032Uninduced0.700

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.308
SRR8400027Control-Root25.471

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved