Gene detail information of Glyur000039s00004204.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33550.1 | 6.00E-80 | Homeodomain-like superfamily protein |
| NR | XP_003551802.1 | 0 | PREDICTED: uncharacterized protein LOC100788594 [Glycine max] |
| Swissprot | tr|Q9C882|GTL1_ARATH | 6.00E-06 | Trihelix transcription factor GTL1 |
| trEMBL | tr|I1N4Y2|I1N4Y2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G51790.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00039 | 186517 | 189732 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Trihelix |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000039s00004204.1 | PF13837.1 | Myb_DNA-bind_4 | 43 | 131 | 9.80E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.547 |
| SRR1783600 | control | 11.195 |
| SRR1783602 | moderate drought stress | 16.580 |
| SRR1811619 | moderate drought stress | 16.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.275 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.008 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.229 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.928 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.313 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.099 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.643 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 16.562 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.826 |
| SRR2967015 | Control (Tissue:root) | 18.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.074 |
| SRR9715740 | Leave | 10.307 |
| SRR9715741 | Leave | 7.857 |
| SRR9715739 | Root | 24.043 |
| SRR9715742 | Root | 15.733 |
| SRR9715743 | Root | 16.788 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 40.733 |
| SRR8749028 | MeJA induced 9h | 15.001 |
| SRR8749029 | MeJA induced 9h | 35.810 |
| SRR8749030 | Uninduced | 7.688 |
| SRR8749031 | Uninduced | 17.807 |
| SRR8749032 | Uninduced | 23.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 16.591 |
| SRR8400027 | Control-Root | 15.362 |