Gene detail information of Glyur000039s00004206.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13290.22.00E-127Protein kinase superfamily protein
NRKEH21855.10receptor-like kinase [Medicago truncatula]
COGYP_004174884.18.00E-13putative protein kinase [Anaerolinea thermophila UNI-1]
Swissprottr|Q9LYU7|CRN_ARATH5.00E-166Inactive leucine-rich repeat receptor-like protein kinase CORYNE (Precursor)
trEMBLtr|A0A072U7R5|A0A072U7R5_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:KEH21855.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00039201841204694+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000039s00004206.1PF00069.20Pkinase1514213.20E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.299
SRR1783600control10.428
SRR1783602moderate drought stress12.083
SRR1811619moderate drought stress11.758

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.764
DRR006520Root Summer glycyrrhizin high producing strain9.621
DRR006521Root Winter glycyrrhizin high producing strain1.098
DRR006522Root Winter glycyrrhizin high producing strain1.031
DRR006523Root Summer glycyrrhizin low producing strain9.534
DRR006524Root Summer glycyrrhizin low producing strain9.566
DRR006525Leaf Summer glycyrrhizin high producing strain2.233
DRR006526Leaf Summer glycyrrhizin high producing strain2.190

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.645
SRR2868004Drought Stress(Tissue:root)12.243
SRR2967015Control (Tissue:root)13.006

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.418
SRR9715740Leave1.827
SRR9715741Leave1.377
SRR9715739Root6.787
SRR9715742Root13.117
SRR9715743Root11.233

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.477
SRR8749028MeJA induced 9h0.630
SRR8749029MeJA induced 9h1.642
SRR8749030Uninduced0.403
SRR8749031Uninduced0.310
SRR8749032Uninduced0.510

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.722
SRR8400027Control-Root28.665

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved