Gene detail information of Glyur000039s00004215.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05830.20trithorax-like protein 2
NRXP_003552647.10PREDICTED: histone-lysine N-methyltransferase ATX2-like [Glycine max]
COGYP_003280830.11.00E-23nuclear protein SET [Comamonas testosteroni CNB-2]
Swissprottr|P0CB22|ATX2_ARATH0Histone-lysine N-methyltransferase ATX2
trEMBLtr|K7MV89|K7MV89_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G51890.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00039271843301323-


Gene family

Gene familysubfamily
Transcription Factors FamilySET


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005634  nucleus


molecular_function

GO:0005515  protein binding

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000039s00004215.1PF00855.12PWWP3274151.60E-16
Glyur000039s00004215.1PF05964.9FYRN4504955.70E-08
Glyur000039s00004215.1PF05965.9FYRC5035788.50E-14
Glyur000039s00004215.1PF13831.1PHD_26256592.30E-11
Glyur000039s00004215.1PF13832.1zf-HC5HC2H_26667875.20E-34
Glyur000039s00004215.1PF00856.23SET92510311.10E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.248
SRR1783600control8.451
SRR1783602moderate drought stress8.424
SRR1811619moderate drought stress8.497

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.022
DRR006520Root Summer glycyrrhizin high producing strain9.719
DRR006521Root Winter glycyrrhizin high producing strain7.490
DRR006522Root Winter glycyrrhizin high producing strain7.422
DRR006523Root Summer glycyrrhizin low producing strain10.446
DRR006524Root Summer glycyrrhizin low producing strain10.328
DRR006525Leaf Summer glycyrrhizin high producing strain9.253
DRR006526Leaf Summer glycyrrhizin high producing strain9.236

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.012
SRR2868004Drought Stress(Tissue:root)15.687
SRR2967015Control (Tissue:root)15.104

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.043
SRR9715740Leave10.684
SRR9715741Leave12.576
SRR9715739Root0.935
SRR9715742Root8.169
SRR9715743Root7.848

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.711
SRR8749028MeJA induced 9h15.299
SRR8749029MeJA induced 9h15.862
SRR8749030Uninduced5.339
SRR8749031Uninduced9.833
SRR8749032Uninduced7.596

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.301
SRR8400027Control-Root14.015

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved