Gene detail information of Glyur000039s00004228.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G28040.10Leucine-rich receptor-like protein kinase family protein
NRXP_003518672.10PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max]
COGYP_004775215.18.00E-45RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9LRT1|Y3804_ARATH0Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 (Precursor)
trEMBLtr|I1JDU5|I1JDU5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G10770.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00039362238365928-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000039s00004228.1PF08263.7LRRNT_234744.90E-10
Glyur000039s00004228.1PF00560.28LRR_11031220.18
Glyur000039s00004228.1PF00560.28LRR_11271480.048
Glyur000039s00004228.1PF13855.1LRR_81522119.60E-08
Glyur000039s00004228.1PF00560.28LRR_12252440.64
Glyur000039s00004228.1PF13855.1LRR_82733311.80E-06
Glyur000039s00004228.1PF00560.28LRR_13453650.13
Glyur000039s00004228.1PF13855.1LRR_83934522.30E-06
Glyur000039s00004228.1PF00069.20Pkinase6939647.40E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control83.873
SRR1783600control83.746
SRR1783602moderate drought stress67.533
SRR1811619moderate drought stress67.165

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain49.460
DRR006520Root Summer glycyrrhizin high producing strain48.602
DRR006521Root Winter glycyrrhizin high producing strain8.036
DRR006522Root Winter glycyrrhizin high producing strain7.682
DRR006523Root Summer glycyrrhizin low producing strain38.056
DRR006524Root Summer glycyrrhizin low producing strain37.528
DRR006525Leaf Summer glycyrrhizin high producing strain10.740
DRR006526Leaf Summer glycyrrhizin high producing strain10.623

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.679
SRR2868004Drought Stress(Tissue:root)11.883
SRR2967015Control (Tissue:root)10.758

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.857
SRR9715740Leave1.449
SRR9715741Leave2.462
SRR9715739Root14.404
SRR9715742Root33.202
SRR9715743Root28.879

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.095
SRR8749028MeJA induced 9h0.030
SRR8749029MeJA induced 9h0.087
SRR8749030Uninduced0.000
SRR8749031Uninduced0.016
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.600
SRR8400027Control-Root63.180

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved