Gene detail information of Glyur000039s00004240.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13110.10glucose-6-phosphate dehydrogenase 2
NRXP_003518668.10PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [Glycine max]
COGYP_005366914.14.00E-128glucose-6-phosphate 1-dehydrogenase [Corallococcus coralloides DSM 2259]
Swissprottr|Q43793|G6PDC_TOBAC0Glucose-6-phosphate 1-dehydrogenase, chloroplastic (Precursor)
trEMBLtr|I1JDT9|I1JDT9_SOYBN0Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|RuleBase:RU000497}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00039425053429879+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00036G6PD, zwf EC:1.1.1.49 1.1.1.363 Carbon metabolism map01200
Pentose phosphate pathwaymap00030
Glutathione metabolismmap00480
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006006  glucose metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004345  glucose-6-phosphate dehydrogenase activity

GO:0050661  NADP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000039s00004240.1PF00479.17G6PD_N1132911.60E-62
Glyur000039s00004240.1PF02781.11G6PD_C2945896.70E-116


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.861
SRR1783600control19.221
SRR1783602moderate drought stress25.001
SRR1811619moderate drought stress24.492

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.077
DRR006520Root Summer glycyrrhizin high producing strain17.056
DRR006521Root Winter glycyrrhizin high producing strain8.323
DRR006522Root Winter glycyrrhizin high producing strain8.189
DRR006523Root Summer glycyrrhizin low producing strain13.677
DRR006524Root Summer glycyrrhizin low producing strain13.839
DRR006525Leaf Summer glycyrrhizin high producing strain12.471
DRR006526Leaf Summer glycyrrhizin high producing strain12.408

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.093
SRR2868004Drought Stress(Tissue:root)38.054
SRR2967015Control (Tissue:root)35.381

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.828
SRR9715740Leave15.342
SRR9715741Leave14.808
SRR9715739Root6.635
SRR9715742Root24.513
SRR9715743Root21.014

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h40.790
SRR8749028MeJA induced 9h24.278
SRR8749029MeJA induced 9h22.290
SRR8749030Uninduced18.063
SRR8749031Uninduced33.203
SRR8749032Uninduced13.496

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.690
SRR8400027Control-Root31.859

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved