Gene detail information of Glyur000040s00007332.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G61130.10galacturonosyltransferase 1
NRXP_004510897.10PREDICTED: polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1 [Cicer arietinum]
COGYP_007713204.14.00E-07hypothetical protein MMALV_05390 [Candidatus Methanomethylophilus alvus Mx1201]
Swissprottr|Q9LE59|GAUT1_ARATH0Polygalacturonate 4-alpha-galacturonosyltransferase
trEMBLtr|V7AQP2|V7AQP2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW06923.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000402761933524+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13648GAUT EC:2.4.1.43 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

molecular_function

GO:0016757  transferase activity, transferring glycosyl groups

GO:0047262  polygalacturonate 4-alpha-galacturonosyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000040s00007332.1PF01501.15Glyco_transf_83296441.30E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.981
SRR1783600control21.865
SRR1783602moderate drought stress17.698
SRR1811619moderate drought stress17.453

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.965
DRR006520Root Summer glycyrrhizin high producing strain26.378
DRR006521Root Winter glycyrrhizin high producing strain14.049
DRR006522Root Winter glycyrrhizin high producing strain13.937
DRR006523Root Summer glycyrrhizin low producing strain18.408
DRR006524Root Summer glycyrrhizin low producing strain18.986
DRR006525Leaf Summer glycyrrhizin high producing strain14.293
DRR006526Leaf Summer glycyrrhizin high producing strain14.286

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.354
SRR2868004Drought Stress(Tissue:root)28.429
SRR2967015Control (Tissue:root)32.101

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.838
SRR9715740Leave7.991
SRR9715741Leave11.884
SRR9715739Root2.262
SRR9715742Root10.386
SRR9715743Root8.461

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.185
SRR8749028MeJA induced 9h19.949
SRR8749029MeJA induced 9h11.646
SRR8749030Uninduced3.219
SRR8749031Uninduced2.344
SRR8749032Uninduced2.605

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.266
SRR8400027Control-Root55.834

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved