Gene detail information of Glyur000040s00007333.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G07200.12.00E-114gibberellin 20-oxidase 3
NRKEH19017.10gibberellin 20-oxidase [Medicago truncatula]
COGNP_252880.17.00E-29iron/ascorbate oxidoreductase [Pseudomonas aeruginosa PAO1]
Swissprottr|Q39112|GAOX3_ARATH4.00E-143Gibberellin 20 oxidase 3
trEMBLtr|A0A072TNN1|A0A072TNN1_MEDTR0Gibberellin 20-oxidase {ECO:0000313|EMBL:KEH19017.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000404228244349+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05282E1.14.11.12 EC:1.14.11.12 Diterpenoid biosynthesis map00904


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000040s00007333.1PF14226.1DIOX_N651663.90E-25
Glyur000040s00007333.1PF03171.152OG-FeII_Oxy1952933.00E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.075
SRR1783600control0.060
SRR1783602moderate drought stress0.443
SRR1811619moderate drought stress0.397

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.395
DRR006520Root Summer glycyrrhizin high producing strain2.546
DRR006521Root Winter glycyrrhizin high producing strain0.277
DRR006522Root Winter glycyrrhizin high producing strain0.356
DRR006523Root Summer glycyrrhizin low producing strain0.793
DRR006524Root Summer glycyrrhizin low producing strain0.648
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.515
SRR2868004Drought Stress(Tissue:root)6.709
SRR2967015Control (Tissue:root)3.292

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.126
SRR9715740Leave0.139
SRR9715741Leave0.043
SRR9715739Root1.169
SRR9715742Root9.798
SRR9715743Root9.339

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.291
SRR8749028MeJA induced 9h0.055
SRR8749029MeJA induced 9h0.100
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.536
SRR8400027Control-Root2.622

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved