Gene detail information of Glyur000040s00007334.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G46400.15.00E-20WRKY DNA-binding protein 46
NRXP_007134564.12.52E-80hypothetical protein PHAVU_010G057900g [Phaseolus vulgaris]
Swissprottr|Q9SKD9|WRK46_ARATH2.00E-22Probable WRKY transcription factor 46
trEMBLtr|V7APM3|V7APM3_PHAVU9.00E-81Uncharacterized protein {ECO:0000313|EMBL:ESW06558.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000404980151367+


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000040s00007334.1PF03106.10WRKY1472077.70E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.433
SRR1783600control1.542
SRR1783602moderate drought stress0.137
SRR1811619moderate drought stress0.194

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.116
DRR006520Root Summer glycyrrhizin high producing strain0.217
DRR006521Root Winter glycyrrhizin high producing strain1.064
DRR006522Root Winter glycyrrhizin high producing strain0.835
DRR006523Root Summer glycyrrhizin low producing strain0.606
DRR006524Root Summer glycyrrhizin low producing strain0.472
DRR006525Leaf Summer glycyrrhizin high producing strain0.433
DRR006526Leaf Summer glycyrrhizin high producing strain0.431

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.044
SRR2868004Drought Stress(Tissue:root)1.225
SRR2967015Control (Tissue:root)1.258

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.502
SRR9715740Leave0.877
SRR9715741Leave0.742
SRR9715739Root0.186
SRR9715742Root0.283
SRR9715743Root0.174

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.274
SRR8749028MeJA induced 9h0.360
SRR8749029MeJA induced 9h0.855
SRR8749030Uninduced0.034
SRR8749031Uninduced0.112
SRR8749032Uninduced0.044

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.935
SRR8400027Control-Root0.922

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved