Gene detail information of Glyur000040s00007340.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45600.1 | 3.00E-88 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003627649.1 | 3.67E-171 | Gibberellin receptor GID1 [Medicago truncatula] |
| COG | YP_706618.1 | 7.00E-20 | esterase [Rhodococcus jostii RHA1] |
| Swissprot | tr|O64640|CXE8_ARATH | 2.00E-124 | Probable carboxylesterase 8 |
| trEMBL | tr|G7LCQ8|G7LCQ8_MEDTR | 1.00E-171 | Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AET02125.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00040 | 77478 | 78497 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000040s00007340.1 | PF07859.8 | Abhydrolase_3 | 88 | 311 | 8.30E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.106 |
| SRR1783600 | control | 0.105 |
| SRR1783602 | moderate drought stress | 0.173 |
| SRR1811619 | moderate drought stress | 0.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.106 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.105 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.779 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.086 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.048 |
| SRR2967015 | Control (Tissue:root) | 0.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.161 |
| SRR9715740 | Leave | 0.600 |
| SRR9715741 | Leave | 0.140 |
| SRR9715739 | Root | 0.406 |
| SRR9715742 | Root | 0.508 |
| SRR9715743 | Root | 0.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.002 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.002 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.066 |
| SRR8400027 | Control-Root | 0.149 |