Gene detail information of Glyur000040s00007349.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45550.13.00E-127cytochrome P450, family 76, subfamily C, polypeptide 4
NRXP_003521519.10PREDICTED: geraniol 8-hydroxylase-like [Glycine max]
COGYP_004643624.11.00E-41cytochrome P450 hydroxylase [Paenibacillus mucilaginosus KNP414]
Swissprottr|Q8VWZ7|C76B6_CATRO2.00E-179Geraniol 8-hydroxylase
trEMBLtr|I1JKJ6|I1JKJ6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G02410.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00040136141137990+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP76C4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000040s00007349.1PF00067.17p450374913.90E-104


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.110
SRR1783600control0.176
SRR1783602moderate drought stress0.400
SRR1811619moderate drought stress0.389

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain4.534
DRR006522Root Winter glycyrrhizin high producing strain4.325
DRR006523Root Summer glycyrrhizin low producing strain0.067
DRR006524Root Summer glycyrrhizin low producing strain0.067
DRR006525Leaf Summer glycyrrhizin high producing strain0.392
DRR006526Leaf Summer glycyrrhizin high producing strain0.390

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.018
SRR2868004Drought Stress(Tissue:root)19.763
SRR2967015Control (Tissue:root)10.609

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.241
SRR9715740Leave0.038
SRR9715741Leave0.107
SRR9715739Root1.681
SRR9715742Root1.388
SRR9715743Root1.190

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.640
SRR8749028MeJA induced 9h171.275
SRR8749029MeJA induced 9h28.824
SRR8749030Uninduced177.925
SRR8749031Uninduced135.507
SRR8749032Uninduced74.061

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.311
SRR8400027Control-Root3.443

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved