Gene detail

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Gene detail information of Glyur000040s00007351.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G61040.1	3.00E-112	cytochrome P450, family 76, subfamily C, polypeptide 7
NR	XP_004514899.1	0	PREDICTED: geraniol 8-hydroxylase-like [Cicer arietinum]
COG	YP_004303682.1	7.00E-29	cytochrome P450 [Polymorphum gilvum SL003B-26A1]
Swissprot	tr\|Q8VWZ7\|C76B6_CATRO	4.00E-136	Geraniol 8-hydroxylase
trEMBL	tr\|I1JKJ6\|I1JKJ6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G02410.1}

Sequence

Transcript Sequence

>Glyur000040s00007351.1
GGACAATTATCTTCTTCTTCATCTCTTTCCATGGCAGCAAAATAACCTCTAAACCTTCCAAGCTCCCACCAGGTCCTCGCCCTTACCCAATCATTGGAAACATCTTGGAGCTGGTTGGAAGCAACCCACTAGTTGTATTCACTCACCTTTCCAAAACCTATGGACCCATAATGACTCTCAAGTTGGGCACCACAACCACCATAGTGGTTTCATCTCCACAAATAGCCAAAGAAGCACTCCACACAAATGACATAGTCTTTTCAAGCAGGGCAGTCCCAGATGCTGCAAAGACACTTGGCCATCACAAAGTCTCCATGGTATGGATGCCCCCTTCAGCTAAATGGAGAACCCTTAGAAGAGCTTGTGCCACCAAAATATTCTCCTCACAACAGCTAGATTCTACTCAATTCCACCGTAAGAGAAAGATTCAAGACTTGCTTAATTTTGTGCATCAGTGCTGCCAGAAAGGTGGGGCCTTTGATTTTGGTGAGGTCATCCTTGCAACAGTCATGAATTCCATATCAGAGACTTTCATCTCCATGGATTTGTTTCGTTATTATAATCATGATGATGCTTCTGATCAGAAGTCAAGGGGGTTTAAGGAGATGGTATTGGGTATTATGGAAGAAGTTGGGAGGCCTAATGTTGTGGACTTTTTCCCTTTCTTCCGGTTGTTTGACCCGCAGGGTGTGAGGGCAAGGATGAGAAATCACTTTGGGAAGTTGCTTGCGTTCTTTGATGGCGTTATGGAAGAAAGAATACGTTTAAGAGCCTCGGAATCTAATGAGGAGTGCAACGATGTGTTGGATTCCTTTCTGGATCTTCTCAAAGAAGAGAGTTCCCAATTGAGTCGTCGTGATGTCCTGCATTTATTTACTGATTTATTTGCAGCTGGAATAGACACAACATCAACCACAGTGGAATGGGCAATGGCAGAGTTGCTCCATAACCCACCAAAATTGGCAAGGGTTAGAGAGGAACTTCAACAAATACATGGAAATTTTGGACAAATTGAAGAGTTTGAAGCCTCAAAGTTGCCTTACCTAAGGGCAGTGGTGAAGGAAACATTACGGCTTCACCCACCAGTTCCATTTCTAGTACCTCACAAGTCAAAGGATGATGGGGAGTTAGCTGGCTTCACAATACCCAAAGACGCACAAATCCTAGTTAATGTGTGGTCAATTGGACGAGATCCAAGCAATTGGGCTGACCCGAGTTCATTTGAACCTGAAAGGTTTCTGGAGGGTGATGAGATTGATTTCAAAGGCAGAGATTTTGAACTTGTCCCATTTGGTGCGGGTAGAAGAATTTGCCCTGGATTACCACTGGCTTCCCGGTCCATCCACTACATATTGGCCTCTCTTTTGCATCACTTTGAATGGAAGCTTGCTGATGGGGCTGAAACCGGAAGAGATGGATATGAGTCATATGTTTGGGGTTACATTACATAAGGCTCAACCCCTTCGAGTTGTACCTATCAAAATTTAGATGGTTATACGAAGATTCATGGTTTAGGAACAATCAGGTCTCTATATCACTTTTTTGTCCAATTTTTAACGTTAGGAGGTTGGCACCACTATTGACTTGCAAATCATCAAGTATTCTTCAGAAGTGTTGATAATGGATCTACTATTGCCAATAATATGAGATCCACATATCAATACTCGATTATTTTGCCAAGTCAACAGTGTCAACTTATCCTAACTTAATGTCAGACCATATCCACGTTTGTCACATAGGCTCTTAGTGTTAAAAATTAGACGACAAAGTAATAAAGAGACCTGACATGGAAGACCAAAATCGTAATACCTAAAAAATCAAAAATACAATTAAGCCAAGATTCAATTAGCAAATAAATCATAC

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00040	144835	147019	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP76C7

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000040s00007351.1	PF00067.17	p450	1	409	2.50E-88

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.476
SRR1783600	control	4.480
SRR1783602	moderate drought stress	6.535
SRR1811619	moderate drought stress	6.323

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.889
DRR006520	Root Summer glycyrrhizin high producing strain	4.788
DRR006521	Root Winter glycyrrhizin high producing strain	4.430
DRR006522	Root Winter glycyrrhizin high producing strain	4.260
DRR006523	Root Summer glycyrrhizin low producing strain	2.606
DRR006524	Root Summer glycyrrhizin low producing strain	2.608
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.333
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.011

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	3.886
SRR2868004	Drought Stress(Tissue:root)	3.954
SRR2967015	Control (Tissue:root)	3.469

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	11.472
SRR9715740	Leave	23.135
SRR9715741	Leave	13.068
SRR9715739	Root	5.513
SRR9715742	Root	3.576
SRR9715743	Root	3.196

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.588
SRR8749028	MeJA induced 9h	2.030
SRR8749029	MeJA induced 9h	1.418
SRR8749030	Uninduced	0.872
SRR8749031	Uninduced	0.370
SRR8749032	Uninduced	0.579

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	3.663
SRR8400027	Control-Root	4.109