Gene detail information of Glyur000041s00007085.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G52150.10Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
NRXP_004510296.10PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform X1 [Cicer arietinum]
Swissprottr|Q9ZU11|ATB15_ARATH0Homeobox-leucine zipper protein ATHB-15
trEMBLtr|V7APR6|V7APR6_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW07637.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000413756845765+


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0008289  lipid binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000041s00007085.1PF00046.24Homeobox17753.10E-16
Glyur000041s00007085.1PF01852.14START1613685.10E-50
Glyur000041s00007085.1PF08670.6MEKHLA6908305.90E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.920
SRR1783600control10.965
SRR1783602moderate drought stress16.934
SRR1811619moderate drought stress17.010

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.341
DRR006520Root Summer glycyrrhizin high producing strain25.004
DRR006521Root Winter glycyrrhizin high producing strain16.391
DRR006522Root Winter glycyrrhizin high producing strain16.020
DRR006523Root Summer glycyrrhizin low producing strain22.541
DRR006524Root Summer glycyrrhizin low producing strain22.614
DRR006525Leaf Summer glycyrrhizin high producing strain4.844
DRR006526Leaf Summer glycyrrhizin high producing strain4.912

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.786
SRR2868004Drought Stress(Tissue:root)40.434
SRR2967015Control (Tissue:root)39.583

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.402
SRR9715740Leave12.851
SRR9715741Leave9.089
SRR9715739Root7.894
SRR9715742Root25.612
SRR9715743Root20.448

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.811
SRR8749028MeJA induced 9h4.869
SRR8749029MeJA induced 9h2.507
SRR8749030Uninduced0.821
SRR8749031Uninduced0.321
SRR8749032Uninduced0.297

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.057
SRR8400027Control-Root39.112

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved