Gene detail information of Glyur000041s00007090.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G25760.10Protein kinase family protein
NRXP_004510300.10PREDICTED: uncharacterized protein LOC101511720 [Cicer arietinum]
COGYP_006806628.17.00E-12serine/threonine protein kinase [Nocardia brasiliensis ATCC 700358]
Swissprottr|P42158|KC1D_ARATH2.00E-44Casein kinase I isoform delta-like
trEMBLtr|F6HYA9|F6HYA9_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB59432.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0004178923100328+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000041s00007090.2PF00069.20Pkinase2264004.90E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.113
SRR1783600control22.112
SRR1783602moderate drought stress22.662
SRR1811619moderate drought stress22.424

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.646
DRR006520Root Summer glycyrrhizin high producing strain23.145
DRR006521Root Winter glycyrrhizin high producing strain29.779
DRR006522Root Winter glycyrrhizin high producing strain28.645
DRR006523Root Summer glycyrrhizin low producing strain23.153
DRR006524Root Summer glycyrrhizin low producing strain24.044
DRR006525Leaf Summer glycyrrhizin high producing strain11.094
DRR006526Leaf Summer glycyrrhizin high producing strain11.206

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.430
SRR2868004Drought Stress(Tissue:root)34.303
SRR2967015Control (Tissue:root)33.329

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.915
SRR9715740Leave14.987
SRR9715741Leave16.822
SRR9715739Root10.028
SRR9715742Root29.730
SRR9715743Root25.191

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.721
SRR8749028MeJA induced 9h27.070
SRR8749029MeJA induced 9h19.544
SRR8749030Uninduced30.959
SRR8749031Uninduced18.132
SRR8749032Uninduced22.429

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.792
SRR8400027Control-Root36.315

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved