Gene detail information of Glyur000041s00007095.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G32375.1 | 4.00E-06 | F-box/RNI-like/FBD-like domains-containing protein |
| NR | XP_003627023.1 | 2.12E-14 | F-box/FBD/LRR-repeat protein [Medicago truncatula] |
| trEMBL | tr|G7LGL9|G7LGL9_MEDTR | 8.00E-15 | F-box/RNI/FBD-like domain protein {ECO:0000313|EMBL:AET01499.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00041 | 125583 | 126430 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000041s00007095.1 | PF08387.5 | FBD | 70 | 110 | 1.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.067 |
| SRR1783600 | control | 1.666 |
| SRR1783602 | moderate drought stress | 5.088 |
| SRR1811619 | moderate drought stress | 4.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.658 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.769 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.789 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.123 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.663 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.324 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.103 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.131 |
| SRR2967015 | Control (Tissue:root) | 0.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.070 |
| SRR9715740 | Leave | 0.156 |
| SRR9715741 | Leave | 0.296 |
| SRR9715739 | Root | 0.741 |
| SRR9715742 | Root | 1.346 |
| SRR9715743 | Root | 2.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.133 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.755 |
| SRR8400027 | Control-Root | 3.097 |