Gene detail information of Glyur000041s00007122.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80380.2 | 3.00E-127 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| NR | NP_001242834.1 | 0 | uncharacterized protein LOC100806896 [Glycine max] |
| COG | YP_005067651.1 | 4.00E-22 | hypothetical protein [Arthrospira platensis NIES-39] |
| Swissprot | tr|Q944I4|GLYK_ARATH | 7.00E-156 | D-glycerate 3-kinase, chloroplastic (Precursor) |
| trEMBL | tr|C6TE37|C6TE37_SOYBN | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU20089.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00041 | 351117 | 357217 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.279 |
| SRR1783600 | control | 7.368 |
| SRR1783602 | moderate drought stress | 8.611 |
| SRR1811619 | moderate drought stress | 8.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.090 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.329 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.793 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.959 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.720 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.428 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 51.551 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 51.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.783 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.827 |
| SRR2967015 | Control (Tissue:root) | 5.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 22.293 |
| SRR9715740 | Leave | 32.017 |
| SRR9715741 | Leave | 19.891 |
| SRR9715739 | Root | 1.154 |
| SRR9715742 | Root | 3.404 |
| SRR9715743 | Root | 3.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.856 |
| SRR8749028 | MeJA induced 9h | 7.686 |
| SRR8749029 | MeJA induced 9h | 5.847 |
| SRR8749030 | Uninduced | 5.026 |
| SRR8749031 | Uninduced | 4.317 |
| SRR8749032 | Uninduced | 4.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.113 |
| SRR8400027 | Control-Root | 9.919 |