Gene detail information of Glyur000041s00007126.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15540.1 | 3.00E-28 | indole-3-acetic acid inducible 19 |
| NR | P32293.1 | 9.47E-48 | RecName: Full=Auxin-induced protein 22A; AltName: Full=Indole-3-acetic acid-induced protein ARG3 [Vigna radiata var. radiata] |
| Swissprot | tr|P32293|AX22A_VIGRR | 4.00E-50 | Auxin-induced protein 22A |
| trEMBL | tr|C6TBC6|C6TBC6_SOYBN | 4.00E-47 | Auxin-induced protein {ECO:0000256|RuleBase:RU004549} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00041 | 378805 | 379182 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | AUX/IAA |
| EAR motif-containing Proteins | AUX/IAA |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000041s00007126.1 | PF02309.11 | AUX_IAA | 6 | 125 | 1.20E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.181 |
| SRR1783602 | moderate drought stress | 0.195 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.188 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.130 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.568 |
| SRR2967015 | Control (Tissue:root) | 2.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.297 |
| SRR9715740 | Leave | 0.587 |
| SRR9715741 | Leave | 0.537 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.616 |
| SRR9715743 | Root | 0.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.723 |
| SRR8749028 | MeJA induced 9h | 5.206 |
| SRR8749029 | MeJA induced 9h | 7.409 |
| SRR8749030 | Uninduced | 2.457 |
| SRR8749031 | Uninduced | 3.493 |
| SRR8749032 | Uninduced | 9.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.308 |
| SRR8400027 | Control-Root | 2.408 |