Gene detail information of Glyur000041s00007127.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22210.1 | 6.00E-06 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
| NR | XP_006592567.1 | 5.37E-10 | PREDICTED: probable trehalose-phosphate phosphatase D-like [Glycine max] |
| Swissprot | tr|F4I1A6|TPPC_ARATH | 6.00E-07 | Probable trehalose-phosphate phosphatase C |
| trEMBL | tr|K7MR79|K7MR79_SOYBN | 9.00E-10 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G12971.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00041 | 383769 | 385814 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01087 | otsB | EC:3.1.3.12 | Starch and sucrose metabolism | map00500 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.028 |
| SRR1783600 | control | 0.020 |
| SRR1783602 | moderate drought stress | 0.069 |
| SRR1811619 | moderate drought stress | 0.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.086 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.379 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.271 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.870 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.896 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.747 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.209 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.165 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.099 |
| SRR2967015 | Control (Tissue:root) | 0.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.006 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.851 |
| SRR8400027 | Control-Root | 0.157 |