Gene detail information of Glyur000041s00007132.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G31040.1 | 7.00E-83 | PLATZ transcription factor family protein |
| NR | XP_003534871.1 | 5.97E-147 | PREDICTED: uncharacterized protein LOC100806234 [Glycine max] |
| trEMBL | tr|K7LBW3|K7LBW3_SOYBN | 2.00E-147 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G05781.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00041 | 442427 | 448520 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | PLATZ |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000041s00007132.1 | PF04640.9 | PLATZ | 89 | 160 | 6.30E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.182 |
| SRR1783600 | control | 0.183 |
| SRR1783602 | moderate drought stress | 0.843 |
| SRR1811619 | moderate drought stress | 0.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.530 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.534 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.046 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.222 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.764 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.770 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.093 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.423 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.246 |
| SRR2967015 | Control (Tissue:root) | 0.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.067 |
| SRR9715740 | Leave | 0.126 |
| SRR9715741 | Leave | 0.138 |
| SRR9715739 | Root | 0.099 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.212 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.017 |
| SRR8400027 | Control-Root | 0.122 |