Gene detail information of Glyur000042s00005053.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23060.1 | 5.00E-159 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_007156726.1 | 0 | hypothetical protein PHAVU_002G012000g [Phaseolus vulgaris] |
| COG | YP_008433243.1 | 2.00E-07 | hypothetical protein N186_09470 [Thermofilum sp. 1910b] |
| Swissprot | tr|O64815|HLS1L_ARATH | 0 | Probable N-acetyltransferase HLS1-like |
| trEMBL | tr|V7CHH6|V7CHH6_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW28720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00042 | 109992 | 111551 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000042s00005053.1 | PF00583.19 | Acetyltransf_1 | 67 | 158 | 4.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.531 |
| SRR1783600 | control | 0.512 |
| SRR1783602 | moderate drought stress | 0.659 |
| SRR1811619 | moderate drought stress | 0.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.375 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.493 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.637 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.609 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.037 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.039 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.054 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.963 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.547 |
| SRR2967015 | Control (Tissue:root) | 5.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.048 |
| SRR9715741 | Leave | 0.234 |
| SRR9715739 | Root | 0.603 |
| SRR9715742 | Root | 0.654 |
| SRR9715743 | Root | 1.431 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 374.566 |
| SRR8749028 | MeJA induced 9h | 226.714 |
| SRR8749029 | MeJA induced 9h | 78.209 |
| SRR8749030 | Uninduced | 51.176 |
| SRR8749031 | Uninduced | 1.583 |
| SRR8749032 | Uninduced | 9.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.527 |
| SRR8400027 | Control-Root | 1.192 |