Gene detail information of Glyur000042s00005117.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G66880.12.00E-165sucrose nonfermenting 1(SNF1)-related protein kinase 2.3
NRXP_003517280.10PREDICTED: serine/threonine-protein kinase SRK2I-like isoform 1 [Glycine max]
COGYP_004862245.13.00E-25protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
Swissprottr|Q39193|SRK2I_ARATH0Serine/threonine-protein kinase SRK2I
trEMBLtr|I1J941|I1J941_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G39020.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00042449577454522-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14498SNRK2 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000042s00005117.1PF00069.20Pkinase212774.10E-70


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.614
SRR1783600control22.725
SRR1783602moderate drought stress32.568
SRR1811619moderate drought stress32.652

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.825
DRR006520Root Summer glycyrrhizin high producing strain23.184
DRR006521Root Winter glycyrrhizin high producing strain16.235
DRR006522Root Winter glycyrrhizin high producing strain15.594
DRR006523Root Summer glycyrrhizin low producing strain30.195
DRR006524Root Summer glycyrrhizin low producing strain30.429
DRR006525Leaf Summer glycyrrhizin high producing strain5.128
DRR006526Leaf Summer glycyrrhizin high producing strain4.893

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.477
SRR2868004Drought Stress(Tissue:root)52.068
SRR2967015Control (Tissue:root)67.830

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.647
SRR9715740Leave10.587
SRR9715741Leave13.441
SRR9715739Root21.159
SRR9715742Root23.913
SRR9715743Root23.612

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.988
SRR8749028MeJA induced 9h13.346
SRR8749029MeJA induced 9h10.291
SRR8749030Uninduced12.990
SRR8749031Uninduced21.038
SRR8749032Uninduced16.244

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.763
SRR8400027Control-Root33.798