Gene detail information of Glyur000043s00003766.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G52150.10Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
NRXP_004486776.10PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cicer arietinum]
Swissprottr|Q9ZU11|ATB15_ARATH0Homeobox-leucine zipper protein ATHB-15
trEMBLtr|V7BZT0|V7BZT0_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW22608.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000434280449950-


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0008289  lipid binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000043s00003766.1PF00046.24Homeobox14726.40E-16
Glyur000043s00003766.1PF01852.14START1583663.70E-52
Glyur000043s00003766.1PF08670.6MEKHLA6888352.80E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.037
SRR1783600control21.236
SRR1783602moderate drought stress33.543
SRR1811619moderate drought stress33.006

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain53.234
DRR006520Root Summer glycyrrhizin high producing strain52.594
DRR006521Root Winter glycyrrhizin high producing strain43.895
DRR006522Root Winter glycyrrhizin high producing strain43.091
DRR006523Root Summer glycyrrhizin low producing strain40.939
DRR006524Root Summer glycyrrhizin low producing strain41.335
DRR006525Leaf Summer glycyrrhizin high producing strain8.515
DRR006526Leaf Summer glycyrrhizin high producing strain8.348

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.187
SRR2868004Drought Stress(Tissue:root)56.847
SRR2967015Control (Tissue:root)66.481

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.242
SRR9715740Leave8.644
SRR9715741Leave10.076
SRR9715739Root11.884
SRR9715742Root48.945
SRR9715743Root40.105

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.713
SRR8749028MeJA induced 9h24.347
SRR8749029MeJA induced 9h24.034
SRR8749030Uninduced14.334
SRR8749031Uninduced12.785
SRR8749032Uninduced16.717

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root60.101
SRR8400027Control-Root64.069

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved