Gene detail information of Glyur000043s00003802.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G79840.10HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain
NRXP_003546423.20PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine max]
Swissprottr|P46607|HGL2_ARATH0Homeobox-leucine zipper protein GLABRA 2
trEMBLtr|I1MCR0|I1MCR0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G01960.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00043228373234058+


Gene family

Gene familysubfamily
Transcription Factors FamilyHB
EAR motif-containing ProteinsHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0008289  lipid binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000043s00003802.1PF00046.24Homeobox1051601.40E-18
Glyur000043s00003802.1PF01852.14START2774985.50E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.717
SRR1783600control3.794
SRR1783602moderate drought stress4.774
SRR1811619moderate drought stress4.763

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.305
DRR006520Root Summer glycyrrhizin high producing strain5.175
DRR006521Root Winter glycyrrhizin high producing strain0.147
DRR006522Root Winter glycyrrhizin high producing strain0.045
DRR006523Root Summer glycyrrhizin low producing strain3.324
DRR006524Root Summer glycyrrhizin low producing strain3.264
DRR006525Leaf Summer glycyrrhizin high producing strain5.105
DRR006526Leaf Summer glycyrrhizin high producing strain5.027

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.956
SRR2868004Drought Stress(Tissue:root)7.102
SRR2967015Control (Tissue:root)7.633

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.920
SRR9715740Leave5.592
SRR9715741Leave6.347
SRR9715739Root0.560
SRR9715742Root7.801
SRR9715743Root6.063

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.205
SRR8749028MeJA induced 9h0.826
SRR8749029MeJA induced 9h0.187
SRR8749030Uninduced0.839
SRR8749031Uninduced0.392
SRR8749032Uninduced0.107

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.923
SRR8400027Control-Root4.725

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved