Gene detail information of Glyur000043s00003812.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G16110.15.00E-170PDI-like 1-6
NRNP_001235697.10protein disulfide isomerase like protein precursor [Glycine max]
COGYP_007218840.12.00E-09Thioredoxin [Thioalkalivibrio nitratireducens DSM 14787]
Swissprottr|Q66GQ3|PDI16_ARATH0Protein disulfide isomerase-like 1-6 (Precursor)
trEMBLtr|C4T847|C4T847_SOYBN0Protein disulfide isomerase like protein {ECO:0000313|EMBL:BAD42323.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00043262087266937+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09580PDIA1, P4HB EC:5.3.4.1 Protein processing in endoplasmic reticulum map04141


Gene Ontology

biological_process

GO:0045454  cell redox homeostasis



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000043s00003812.1PF00085.15Thioredoxin791825.50E-15
Glyur000043s00003812.1PF13848.1Thioredoxin_62123973.50E-15
Glyur000043s00003812.1PF00085.15Thioredoxin4205123.50E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.333
SRR1783600control28.281
SRR1783602moderate drought stress22.513
SRR1811619moderate drought stress22.500

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.522
DRR006520Root Summer glycyrrhizin high producing strain26.936
DRR006521Root Winter glycyrrhizin high producing strain13.515
DRR006522Root Winter glycyrrhizin high producing strain13.034
DRR006523Root Summer glycyrrhizin low producing strain25.560
DRR006524Root Summer glycyrrhizin low producing strain25.185
DRR006525Leaf Summer glycyrrhizin high producing strain9.828
DRR006526Leaf Summer glycyrrhizin high producing strain9.633

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.727
SRR2868004Drought Stress(Tissue:root)36.687
SRR2967015Control (Tissue:root)36.962

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.581
SRR9715740Leave14.483
SRR9715741Leave16.709
SRR9715739Root2.025
SRR9715742Root10.105
SRR9715743Root8.803

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h55.247
SRR8749028MeJA induced 9h53.989
SRR8749029MeJA induced 9h41.759
SRR8749030Uninduced10.708
SRR8749031Uninduced6.782
SRR8749032Uninduced6.460

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root51.807
SRR8400027Control-Root49.983

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved