Gene detail information of Glyur000043s00003829.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24490.1 | 3.00E-54 | Alcohol dehydrogenase transcription factor Myb/SANT-like family protein |
| NR | KHM98767.1 | 5.78E-157 | hypothetical protein glysoja_030820 [Glycine soja] |
| Swissprot | tr|Q9LJG8|ASIL2_ARATH | 2.00E-23 | Trihelix transcription factor ASIL2 {ECO:0000305} |
| trEMBL | tr|I1MCN1|I1MCN1_SOYBN | 4.00E-157 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G01730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00043 | 367534 | 368769 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Trihelix |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000043s00003829.1 | PF13837.1 | Myb_DNA-bind_4 | 181 | 270 | 4.30E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.743 |
| SRR1783600 | control | 4.801 |
| SRR1783602 | moderate drought stress | 5.426 |
| SRR1811619 | moderate drought stress | 5.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.059 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.295 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.902 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.699 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.574 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.013 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.210 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.291 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.911 |
| SRR2967015 | Control (Tissue:root) | 13.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.472 |
| SRR9715740 | Leave | 8.814 |
| SRR9715741 | Leave | 5.552 |
| SRR9715739 | Root | 1.144 |
| SRR9715742 | Root | 3.439 |
| SRR9715743 | Root | 3.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.395 |
| SRR8749028 | MeJA induced 9h | 8.432 |
| SRR8749029 | MeJA induced 9h | 4.325 |
| SRR8749030 | Uninduced | 10.437 |
| SRR8749031 | Uninduced | 3.179 |
| SRR8749032 | Uninduced | 3.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.445 |
| SRR8400027 | Control-Root | 9.524 |