Gene detail information of Glyur000043s00003851.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G21390.12.00E-151S-locus lectin protein kinase family protein
NRAES68373.20S-locus lectin kinase family protein [Medicago truncatula]
COGYP_003523895.11.00E-25serine/threonine protein kinase [Sideroxydans lithotrophicus ES-1]
Swissprottr|O81906|B120_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase B120 (Precursor)
trEMBLtr|G7IVA0|G7IVA0_MEDTR0Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00043467258472050-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000043s00003851.1PF01453.19B_lectin511691.70E-33
Glyur000043s00003851.1PF08276.6PAN_22462974.80E-16
Glyur000043s00003851.1PF07714.12Pkinase_Tyr3816501.20E-48
Glyur000043s00003851.1PF11883.3DUF34036546962.80E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.239
SRR1783600control7.240
SRR1783602moderate drought stress9.017
SRR1811619moderate drought stress8.932

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.366
DRR006520Root Summer glycyrrhizin high producing strain11.264
DRR006521Root Winter glycyrrhizin high producing strain32.747
DRR006522Root Winter glycyrrhizin high producing strain31.501
DRR006523Root Summer glycyrrhizin low producing strain19.609
DRR006524Root Summer glycyrrhizin low producing strain20.181
DRR006525Leaf Summer glycyrrhizin high producing strain2.770
DRR006526Leaf Summer glycyrrhizin high producing strain2.498

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.076
SRR2868004Drought Stress(Tissue:root)19.804
SRR2967015Control (Tissue:root)14.464

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.533
SRR9715740Leave7.083
SRR9715741Leave14.010
SRR9715739Root0.842
SRR9715742Root8.385
SRR9715743Root8.085

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.100
SRR8749028MeJA induced 9h16.273
SRR8749029MeJA induced 9h13.112
SRR8749030Uninduced2.769
SRR8749031Uninduced1.990
SRR8749032Uninduced1.624

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.434
SRR8400027Control-Root22.391

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved