Gene detail information of Glyur000044s00005123.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61240.4 | 8.00E-137 | Protein of unknown function (DUF707) |
| NR | XP_004504995.1 | 0 | PREDICTED: uncharacterized protein LOC101512967 [Cicer arietinum] |
| trEMBL | tr|I1M2B0|I1M2B0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G31820.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00044 | 18 | 6630 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000044s00005123.1 | PF05212.7 | DUF707 | 55 | 350 | 1.30E-122 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.005 |
| SRR1783600 | control | 7.276 |
| SRR1783602 | moderate drought stress | 7.776 |
| SRR1811619 | moderate drought stress | 7.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.397 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.645 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.981 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.962 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.992 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.198 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.976 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 26.319 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.960 |
| SRR2967015 | Control (Tissue:root) | 13.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.374 |
| SRR9715740 | Leave | 2.141 |
| SRR9715741 | Leave | 3.022 |
| SRR9715739 | Root | 4.677 |
| SRR9715742 | Root | 10.458 |
| SRR9715743 | Root | 9.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.555 |
| SRR8749028 | MeJA induced 9h | 22.831 |
| SRR8749029 | MeJA induced 9h | 18.446 |
| SRR8749030 | Uninduced | 32.236 |
| SRR8749031 | Uninduced | 21.682 |
| SRR8749032 | Uninduced | 12.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 45.719 |
| SRR8400027 | Control-Root | 42.274 |