Gene detail information of Glyur000044s00005155.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G21470.13.00E-163riboflavin kinase/FMN hydrolase
NRXP_003529296.10PREDICTED: pseudouridine-5'-monophosphatase-like [Glycine max]
COGYP_005067373.13.00E-40hypothetical protein [Arthrospira platensis NIES-39]
Swissprottr|Q84MD8|FHYRK_ARATH0Riboflavin kinase
trEMBLtr|I1KLD6|I1KLD6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G30970.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00044134398137632+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K20884FHY EC:2.7.1.26 3.1.3.102 Riboflavin metabolism map00740


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0009231  riboflavin biosynthetic process


molecular_function

GO:0008531  riboflavin kinase activity

GO:0016787  hydrolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000044s00005155.1PF13419.1HAD_2612398.20E-24
Glyur000044s00005155.1PF01687.12Flavokinase2854108.40E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.280
SRR1783600control20.443
SRR1783602moderate drought stress18.790
SRR1811619moderate drought stress18.683

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.431
DRR006520Root Summer glycyrrhizin high producing strain21.225
DRR006521Root Winter glycyrrhizin high producing strain28.568
DRR006522Root Winter glycyrrhizin high producing strain27.969
DRR006523Root Summer glycyrrhizin low producing strain23.323
DRR006524Root Summer glycyrrhizin low producing strain23.486
DRR006525Leaf Summer glycyrrhizin high producing strain28.929
DRR006526Leaf Summer glycyrrhizin high producing strain29.126

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)62.682
SRR2868004Drought Stress(Tissue:root)59.874
SRR2967015Control (Tissue:root)51.852

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave40.917
SRR9715740Leave48.998
SRR9715741Leave40.708
SRR9715739Root18.851
SRR9715742Root16.463
SRR9715743Root19.881

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h41.098
SRR8749028MeJA induced 9h35.515
SRR8749029MeJA induced 9h55.041
SRR8749030Uninduced54.956
SRR8749031Uninduced94.401
SRR8749032Uninduced57.456

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root46.975
SRR8400027Control-Root45.187

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved