Gene detail information of Glyur000044s00005185.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G11340.11.00E-137S-locus lectin protein kinase family protein
NRAES90487.20G-type lectin S-receptor-like Serine/Threonine-kinase [Medicago truncatula]
Swissprottr|Q9ZT07|RKS1_ARATH2.00E-168G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 (Precursor)
trEMBLtr|G7JSX3|G7JSX3_MEDTR0Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00044319806330618+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0004713  protein tyrosine kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000044s00005185.1PF01453.19B_lectin761904.10E-29
Glyur000044s00005185.1PF00954.15S_locus_glycop2173284.90E-30
Glyur000044s00005185.1PF08276.6PAN_23524181.20E-22
Glyur000044s00005185.1PF07714.12Pkinase_Tyr5035671.20E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.904
SRR1783600control1.811
SRR1783602moderate drought stress1.810
SRR1811619moderate drought stress9.852

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.034
DRR006520Root Summer glycyrrhizin high producing strain0.014
DRR006521Root Winter glycyrrhizin high producing strain2.039
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain4.195
DRR006524Root Summer glycyrrhizin low producing strain4.135
DRR006525Leaf Summer glycyrrhizin high producing strain2.914
DRR006526Leaf Summer glycyrrhizin high producing strain1.043

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.879
SRR2868004Drought Stress(Tissue:root)0.018
SRR2967015Control (Tissue:root)1.567

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.701
SRR9715740Leave2.257
SRR9715741Leave2.738
SRR9715739Root5.763
SRR9715742Root0.718
SRR9715743Root4.968

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.159
SRR8749028MeJA induced 9h4.300
SRR8749029MeJA induced 9h6.626
SRR8749030Uninduced7.805
SRR8749031Uninduced7.151
SRR8749032Uninduced8.039

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.275
SRR8400027Control-Root0.134

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved