Gene detail information of Glyur000044s00005191.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G54500.15.00E-93flavodoxin-like quinone reductase 1
NRNP_001241601.11.99E-139uncharacterized protein LOC100805113 [Glycine max]
COGYP_006381066.11.00E-62NAD(P)H:quinone oxidoreductase [Advenella kashmirensis WT001]
Swissprottr|Q9LSQ5|FQR1_ARATH4.00E-128NAD(P)H dehydrogenase (quinone) FQR1 {ECO:0000305}
trEMBLtr|C6TD38|C6TD38_SOYBN7.00E-140Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G30750.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00044353968356895+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyAA6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03809wrbA EC:1.6.5.2 Ubiquinone and other terpenoid-quinone biosynthesis map00130


Gene Ontology

biological_process

GO:0045892  negative regulation of transcription, DNA-templated


molecular_function

GO:0010181  FMN binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000044s00005191.1PF03358.10FMN_red181453.60E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control32.758
SRR1783600control32.562
SRR1783602moderate drought stress15.587
SRR1811619moderate drought stress15.533

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain56.400
DRR006520Root Summer glycyrrhizin high producing strain55.964
DRR006521Root Winter glycyrrhizin high producing strain11.760
DRR006522Root Winter glycyrrhizin high producing strain11.361
DRR006523Root Summer glycyrrhizin low producing strain41.955
DRR006524Root Summer glycyrrhizin low producing strain41.535
DRR006525Leaf Summer glycyrrhizin high producing strain31.275
DRR006526Leaf Summer glycyrrhizin high producing strain31.025

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)194.963
SRR2868004Drought Stress(Tissue:root)196.933
SRR2967015Control (Tissue:root)176.649

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.808
SRR9715740Leave41.940
SRR9715741Leave39.170
SRR9715739Root50.521
SRR9715742Root75.887
SRR9715743Root67.050

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h225.794
SRR8749028MeJA induced 9h154.640
SRR8749029MeJA induced 9h199.750
SRR8749030Uninduced120.134
SRR8749031Uninduced161.264
SRR8749032Uninduced125.184

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root84.748
SRR8400027Control-Root97.744

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved