Gene detail information of Glyur000044s00005217.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G48380.13.00E-40BAK1-interacting receptor-like kinase 1
NRAES90509.22.07E-120LRR receptor-like kinase family protein, putative [Medicago truncatula]
COGYP_004579826.19.00E-13hypothetical protein [Lacinutrix sp. 5H-3-7-4]
Swissprottr|Q9ASS4|Y5838_ARATH5.00E-50Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (Precursor)
trEMBLtr|G7JSZ5|G7JSZ5_MEDTR8.00E-121LRR receptor-like kinase family protein, putative {ECO:0000313|EMBL:AES90509.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00044490102497955-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000044s00005217.2PF07714.12Pkinase_Tyr161603.50E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.000
SRR1783602moderate drought stress0.016
SRR1811619moderate drought stress0.029

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.074
DRR006520Root Summer glycyrrhizin high producing strain0.056
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.048
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain3.327
DRR006526Leaf Summer glycyrrhizin high producing strain3.095

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.690
SRR2868004Drought Stress(Tissue:root)1.536
SRR2967015Control (Tissue:root)1.628

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.241
SRR9715740Leave5.993
SRR9715741Leave15.035
SRR9715739Root0.010
SRR9715742Root0.444
SRR9715743Root0.097

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.310
SRR8749028MeJA induced 9h0.208
SRR8749029MeJA induced 9h0.146
SRR8749030Uninduced0.036
SRR8749031Uninduced0.107
SRR8749032Uninduced0.043

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.260
SRR8400027Control-Root0.474

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved