Gene detail information of Glyur000045s00009958.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54630.1 | 2.00E-141 | zinc finger protein-related |
| NR | XP_004505426.1 | 0 | PREDICTED: uncharacterized protein LOC101514605 [Cicer arietinum] |
| trEMBL | tr|C6TA36|C6TA36_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G41530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00045 | 135760 | 138019 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2H2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.528 |
| SRR1783600 | control | 4.566 |
| SRR1783602 | moderate drought stress | 2.321 |
| SRR1811619 | moderate drought stress | 2.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.047 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.955 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.808 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.788 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.496 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.212 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.765 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.969 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.966 |
| SRR2967015 | Control (Tissue:root) | 7.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 14.447 |
| SRR9715740 | Leave | 9.143 |
| SRR9715741 | Leave | 8.683 |
| SRR9715739 | Root | 7.715 |
| SRR9715742 | Root | 12.145 |
| SRR9715743 | Root | 10.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.431 |
| SRR8749028 | MeJA induced 9h | 0.140 |
| SRR8749029 | MeJA induced 9h | 0.158 |
| SRR8749030 | Uninduced | 0.106 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.791 |
| SRR8400027 | Control-Root | 24.134 |