Gene detail information of Glyur000045s00009964.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G54590.20Protein kinase superfamily protein
NRXP_003543284.10PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like isoform X1 [Glycine max]
COGYP_007779934.14.00E-24Serine/threonine protein kinase [Roseburia intestinalis XB6B4]
Swissprottr|Q9LFV3|Y5157_ARATH4.00E-118Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730
trEMBLtr|I1M3G7|I1M3G7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G36140.4}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00045169691174589-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000045s00009964.1PF07714.12Pkinase_Tyr1143682.60E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.568
SRR1783600control11.659
SRR1783602moderate drought stress10.132
SRR1811619moderate drought stress10.201

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.898
DRR006520Root Summer glycyrrhizin high producing strain13.584
DRR006521Root Winter glycyrrhizin high producing strain17.402
DRR006522Root Winter glycyrrhizin high producing strain16.848
DRR006523Root Summer glycyrrhizin low producing strain14.892
DRR006524Root Summer glycyrrhizin low producing strain15.808
DRR006525Leaf Summer glycyrrhizin high producing strain6.918
DRR006526Leaf Summer glycyrrhizin high producing strain6.519

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.349
SRR2868004Drought Stress(Tissue:root)67.978
SRR2967015Control (Tissue:root)57.000

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.369
SRR9715740Leave16.988
SRR9715741Leave27.259
SRR9715739Root11.718
SRR9715742Root13.258
SRR9715743Root12.406

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.280
SRR8749028MeJA induced 9h56.086
SRR8749029MeJA induced 9h34.151
SRR8749030Uninduced103.417
SRR8749031Uninduced92.856
SRR8749032Uninduced50.818

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.795
SRR8400027Control-Root33.057

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved