Gene detail information of Glyur000045s00009966.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AFK48593.1 | 6.56E-07 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T7V1|I3T7V1_LOTJA | 2.00E-07 | Uncharacterized protein {ECO:0000313|EMBL:AFK48593.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00045 | 207379 | 207626 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01885 | EARS, gltX | EC:6.1.1.17 | Porphyrin and chlorophyll metabolism | map00860 |
| Aminoacyl-tRNA biosynthesis | map00970 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.934 |
| SRR1783600 | control | 1.004 |
| SRR1783602 | moderate drought stress | 1.029 |
| SRR1811619 | moderate drought stress | 1.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.177 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.028 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.994 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.687 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.410 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.349 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.591 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.547 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.643 |
| SRR2967015 | Control (Tissue:root) | 7.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.184 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.290 |
| SRR9715742 | Root | 0.644 |
| SRR9715743 | Root | 0.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.090 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.015 |
| SRR8749032 | Uninduced | 0.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.686 |
| SRR8400027 | Control-Root | 2.843 |