Gene detail information of Glyur000045s00009977.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G27270.12.00E-95Quinone reductase family protein
NRXP_002534445.11.42E-135Minor allergen Alt a, putative [Ricinus communis]
COGYP_002346851.13.00E-59TrpR binding protein WrbA [Yersinia pestis CO92]
Swissprottr|Q9LSQ5|FQR1_ARATH4.00E-131NAD(P)H dehydrogenase (quinone) FQR1 {ECO:0000305}
trEMBLtr|B9T876|B9T876_RICCO5.00E-136Minor allergen Alt a, putative {ECO:0000313|EMBL:EEF27937.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00045280982284741-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyAA6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03809wrbA EC:1.6.5.2 Ubiquinone and other terpenoid-quinone biosynthesis map00130


Gene Ontology

biological_process

GO:0045892  negative regulation of transcription, DNA-templated


molecular_function

GO:0010181  FMN binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000045s00009977.1PF03358.10FMN_red171503.30E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.697
SRR1783600control19.756
SRR1783602moderate drought stress11.744
SRR1811619moderate drought stress11.758

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.506
DRR006520Root Summer glycyrrhizin high producing strain24.753
DRR006521Root Winter glycyrrhizin high producing strain11.414
DRR006522Root Winter glycyrrhizin high producing strain10.197
DRR006523Root Summer glycyrrhizin low producing strain23.933
DRR006524Root Summer glycyrrhizin low producing strain24.268
DRR006525Leaf Summer glycyrrhizin high producing strain19.084
DRR006526Leaf Summer glycyrrhizin high producing strain19.520

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)113.622
SRR2868004Drought Stress(Tissue:root)147.711
SRR2967015Control (Tissue:root)76.135

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.761
SRR9715740Leave42.487
SRR9715741Leave44.173
SRR9715739Root17.172
SRR9715742Root38.357
SRR9715743Root34.880

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h195.711
SRR8749028MeJA induced 9h276.185
SRR8749029MeJA induced 9h251.299
SRR8749030Uninduced238.272
SRR8749031Uninduced170.416
SRR8749032Uninduced139.172

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root68.457
SRR8400027Control-Root62.513

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved