Gene detail information of Glyur000045s00009984.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G27290.10S-locus lectin protein kinase family protein
NRXP_007149662.10hypothetical protein PHAVU_005G088700g [Phaseolus vulgaris]
COGYP_001958461.11.00E-18hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|O81832|Y4729_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (Precursor)
trEMBLtr|V7BYK2|V7BYK2_PHAVU0Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00045335289341600-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000045s00009984.1PF01453.19B_lectin791954.40E-29
Glyur000045s00009984.1PF00954.15S_locus_glycop2213306.90E-35
Glyur000045s00009984.1PF08276.6PAN_23554201.40E-21
Glyur000045s00009984.1PF07714.12Pkinase_Tyr5206737.30E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.477
SRR1783600control4.498
SRR1783602moderate drought stress11.658
SRR1811619moderate drought stress11.493

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain135.313
DRR006520Root Summer glycyrrhizin high producing strain133.889
DRR006521Root Winter glycyrrhizin high producing strain7.578
DRR006522Root Winter glycyrrhizin high producing strain7.236
DRR006523Root Summer glycyrrhizin low producing strain239.940
DRR006524Root Summer glycyrrhizin low producing strain240.188
DRR006525Leaf Summer glycyrrhizin high producing strain25.590
DRR006526Leaf Summer glycyrrhizin high producing strain25.577

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.328
SRR2868004Drought Stress(Tissue:root)37.530
SRR2967015Control (Tissue:root)101.980

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave171.708
SRR9715740Leave180.879
SRR9715741Leave148.955
SRR9715739Root121.973
SRR9715742Root196.297
SRR9715743Root160.242

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h172.116
SRR8749028MeJA induced 9h117.021
SRR8749029MeJA induced 9h152.482
SRR8749030Uninduced261.636
SRR8749031Uninduced48.115
SRR8749032Uninduced139.499

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.622
SRR8400027Control-Root79.380

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved