Gene detail information of Glyur000045s00009995.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G20630.10ubiquitin-specific protease 14
NRXP_004487644.10PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like isoform X1 [Cicer arietinum]
Swissprottr|Q8L6Y1|UBP14_ARATH0Ubiquitin carboxyl-terminal hydrolase 14
trEMBLtr|G7IR70|G7IR70_MEDTR0Ubiquitin carboxyl-terminal hydrolase {ECO:0000256|RuleBase:RU004435}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00045432936441038+


Gene family

Gene familysubfamily
Ubiquitin FamilyUSP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006511  ubiquitin-dependent protein catabolic process


molecular_function

GO:0005515  protein binding

GO:0008242  omega peptidase activity

GO:0008270  zinc ion binding

GO:0036459  thiol-dependent ubiquitinyl hydrolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000045s00009995.1PF02148.14zf-UBP1802533.60E-15
Glyur000045s00009995.1PF00443.24UCH3077871.80E-39
Glyur000045s00009995.1PF00627.26UBA6196551.80E-06
Glyur000045s00009995.1PF00627.26UBA6787131.00E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.516
SRR1783600control22.576
SRR1783602moderate drought stress25.106
SRR1811619moderate drought stress24.813

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.474
DRR006520Root Summer glycyrrhizin high producing strain36.818
DRR006521Root Winter glycyrrhizin high producing strain36.243
DRR006522Root Winter glycyrrhizin high producing strain35.349
DRR006523Root Summer glycyrrhizin low producing strain33.741
DRR006524Root Summer glycyrrhizin low producing strain33.997
DRR006525Leaf Summer glycyrrhizin high producing strain12.755
DRR006526Leaf Summer glycyrrhizin high producing strain12.802

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.232
SRR2868004Drought Stress(Tissue:root)36.016
SRR2967015Control (Tissue:root)38.766

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.263
SRR9715740Leave22.820
SRR9715741Leave25.521
SRR9715739Root10.291
SRR9715742Root28.795
SRR9715743Root26.267

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.583
SRR8749028MeJA induced 9h45.498
SRR8749029MeJA induced 9h29.736
SRR8749030Uninduced15.153
SRR8749031Uninduced8.745
SRR8749032Uninduced10.275

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.666
SRR8400027Control-Root37.641

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved