Gene detail information of Glyur000045s00009997.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21440.1 | 5.00E-67 | MYB-like 102 |
| NR | XP_003541861.1 | 2.87E-143 | PREDICTED: transcription factor MYB34-like [Glycine max] |
| Swissprot | tr|Q8GWP0|MYB39_ARATH | 5.00E-63 | Transcription factor MYB39 |
| trEMBL | tr|K7M2E6|K7M2E6_SOYBN | 1.00E-143 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G35810.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00045 | 450059 | 451774 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000045s00009997.1 | PF00249.26 | Myb_DNA-binding | 16 | 63 | 8.30E-16 |
| Glyur000045s00009997.1 | PF00249.26 | Myb_DNA-binding | 69 | 113 | 5.80E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.009 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.381 |
| SRR1811619 | moderate drought stress | 0.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.794 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.085 |
| SRR2967015 | Control (Tissue:root) | 1.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.456 |
| SRR9715740 | Leave | 0.231 |
| SRR9715741 | Leave | 0.307 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.451 |
| SRR9715743 | Root | 0.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.868 |
| SRR8749028 | MeJA induced 9h | 5.733 |
| SRR8749029 | MeJA induced 9h | 1.130 |
| SRR8749030 | Uninduced | 5.934 |
| SRR8749031 | Uninduced | 1.148 |
| SRR8749032 | Uninduced | 0.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.094 |
| SRR8400027 | Control-Root | 0.926 |